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The rpoB gene encodes the β subunit of bacterial RNA polymerase and the homologous plastid-encoded RNA polymerase (PEP). It codes for 1342 amino acids
RpoB
RNA family
Rhodo-rpoB RNA motif is a conserved RNA structure that was discovered by bioinformatics. Rhodo-rpoB motifs are found in Rhodobacterales. Rhodo-rpoB motif
Rhodo-rpoB_RNA_motif
RNA family
The Lacto-rpoB RNA motif is a conserved RNA structure identified by bioinformatics. It has been detected only in lactic acid bacteria, and is always located
Lacto-rpoB_RNA_motif
RNA family
Thermales-rpoB RNA motif is a conserved RNA structure that was discovered by bioinformatics. Thermales-rpoB motifs are found in Thermales. Thermales-rpoB motif
Thermales-rpoB_RNA_motif
Species of bacterium
are the same species. When testing for DNA-DNA similarity comparing the rpoB gene of K. cowanii, the strains BCC 009, BCC 011, BCC 078 showed 76% to 92%
Kosakonia_cowanii
Antibiotic medication
map to the rpoB gene, encoding the beta subunit of RNA polymerase. The majority of resistance mutations in E. coli are in 3 clusters on rpoB. Cluster I
Rifampicin
Subfamily of flowering plants
are presence of styles with glabrous style branches and a deletion in the rpoB gene. Two tribes, Wunderlicheae and Hyalideae, are recognised. Panero, J
Wunderlichioideae
Scientific naming of genes
letter is upper-case. E.g. the name of RNA polymerase is RpoB, and this protein is encoded by rpoB gene. The research communities of vertebrate model organisms
Gene_nomenclature
Enzyme that synthesizes RNA from DNA
chloroplasts. β The β subunit is the second-largest subunit, and is encoded by the rpoB gene. The β subunit contains the rest of the active center responsible for
RNA_polymerase
Genus of bacteria
the diversity of Paenibacillus species in environmental samples by a novel rpoB-based PCR-DGGE method". FEMS Microbiology Ecology. 53 (2): 317–28. doi:10
Paenibacillus
Genus of bacteria
Mobiluncus form a monophyletic clade in a phylogenetic tree constructed using RpoB, RpoC, and DNA gyrase B protein sequences. This clade is also strongly supported
Actinomyces
Medical condition
drugs, making the bacteria drug-resistant. One example is a mutation in the rpoB gene, which encodes the beta subunit of the bacterium's RNA polymerase enzyme
Multidrug-resistant tuberculosis
Multidrug-resistant_tuberculosis
Bacterium that causes tuberculosis
mutations in the rifampin-resistance determining region (RRDR) within the rpoB gene. The most frequently observed mutations of the codons in RRDR are 531
Mycobacterium_tuberculosis
Genus of bacteria
Wollinella. Additionally, a rare genetic event has led to the fusion of the rpoB and rpoC genes in this family, which is characteristic of them. Recently
Helicobacter
Genus of Gram-positive bacteria
Staphylococcus species based on different partial gap, 16S rRNA, hsp60, rpoB, sodA, and tuf gene sequences". Journal of Clinical Microbiology. 46 (3):
Staphylococcus
Species of bacterium
found in healthy cats. The species may be closely related (on the basis of rpoB sequence) to Pasteurella multocida. Inzana, TJ; Johnson, JL; Shell, L; Møller
Haemophilus_felis
Species of bacterium
lepromatosis displays a 2.1% genomic discrepancy from other Mycobacterium. The rpoB and hspa5 gene sequences were also analyzed, displaying speciation from its
Mycobacterium_lepromatosis
Process of copying a segment of DNA into RNA
Eukaryotic Archaeal transcription factor B Elongation bacterial RNA polymerase: rpoB eukaryotic RNA polymerase: RNA polymerase II Termination (bacterial, eukaryotic)
Transcription_(biology)
Phylum of bacteria
the CSIs that were identified, 32 in widely distributed proteins such as RpoB, RpoC, UvrD, GyrA, PolA, PolC, MraW, NadD, PyrE, RpsA, RpsH, FtsA, RadA,
Synergistota
Disease treatment
pending the result of laboratory sensitivity testing. A gene probe for rpoB is available in some countries and this serves as a useful marker for MDR-TB
Management_of_tuberculosis
Tuberculosis disgnostic and antibiotic sensitivity test
relevant Rifampicin resistance inducing mutations in the RNA polymerase beta (rpoB) gene in the Mycobacterium tuberculosis genome in a real time format using
GeneXpert_MTB/RIF
Genus of bacteria
Microbiology: Corynebacterium [1] Khamis, A.; Raoult, D.; Scola, B. La (2004). "rpoB gene sequencing for identification of Corynebacterium species". Journal of
Corynebacterium
Phylum of bacteria
supported by CSIs in a number of important proteins (viz. Hsp70, Hsp60, RpoB, RpoB and AlaRS), which support its placement in the proximity of the phylum
Aquificota
Closely related bacterium species that cause tuberculosis
An example is the N1177 strain, which carries a single mutation in the rpoB gene that confers resistance to rifampicin that modified transcription levels
Mycobacterium tuberculosis complex
Mycobacterium_tuberculosis_complex
RNA component
Holmström C, Doolittle WF, Kjelleberg S (January 2007). "Use of 16S rRNA and rpoB genes as molecular markers for microbial ecology studies". Applied and Environmental
16S_ribosomal_RNA
Method of species identification using a short section of DNA
suggest COI, type II chaperonin (cpn60) or β subunit of RNA polymerase (rpoB) also could serve as bacterial DNA barcodes. Barcoding fungi is more challenging
DNA_barcoding
Species of bacterium
16S rRNA, though both species can be differentiated by their hsp65, ITS or rpoB gene sequences.[citation needed] A draft genome sequence of M. abscessus
Mycobacteroides_abscessus
I.; Broka, L.; Marga, O.; Baumanis, V. (2002-10-01). "Mutations in the rpoB and katG Genes Leading to Drug Resistance in Mycobacterium tuberculosis in
KatG
Species of bacteria
as Klebsiella pneumoniae. Phylogenic comparisons between the 16s rRNA and rpoB genes of this and other Klebsiella species have suggested classification
Raoultella_terrigena
Species of bacterium
rods usually grouped in pairs. The bacteria are non-motile, and 16S rRNA, rpoB, parC and ftsY gene sequencing indicate that this bacterium is clearly different
Diplorickettsia_massiliensis
Species of bacterium
already identified. Among them, 16S rRNA, 23S rRNA, RNA polymerase subunit B (rpoB), and manganese-dependent superoxide dismutase (sodA) are used to study Pasteurella
Pasteurella_canis
Superphylum of bacteria
other bacteria. A three-amino-acid insert in the RNA polymerase protein RpoB has been found that is shared by all sequenced Verrucomicrobia, Chlamydiae
PVC_superphylum
UTR element T-box leader terC RNA motif Termite-leu RNA motif Thermales-rpoB RNA motif Togavirus 5′ plus strand cis-regulatory element Tombusvirus 3′
List of cis-regulatory RNA elements
List_of_cis-regulatory_RNA_elements
Species of flowering plants in the rock rose family Cistaceae
Vicente-Colomer, María José & Egea-Cortines, Marcos (2012), "Two alleles of rpoB and rpoC1 distinguish an endemic European population from Cistus heterophyllus
Cistus_heterophyllus
DNA synthesis technique
Gwendolyn L. (2014-05-01). "Rolling Circle Amplification for Direct Detection of rpoB Gene Mutations in Mycobacterium tuberculosis Isolates from Clinical Specimens"
Rolling_circle_replication
Species of prokaryote
approach including MALDI-TOF mass spectrometry, phylogeny of 16S rRNA and rpoB genes and DNA fingerprinting. To date, it has been regarded as endemic to
Corynebacterium_uropygiale
Shared protein sequence feature
phyla as well as Archaea. Similarly a large CSI of about 100 amino acids in RpoB homologs (between amino acids 919-1058) is present in various species belonging
Conserved_signature_indels
Species of bacterium
characteristics M. conceptionense shares 99.7% 16S rRNA (4-bp difference) and 97.0% rpoB gene sequence similarity with Mycobacterium porcinum, the nearest species
Mycobacterium_conceptionense
Genus of eukaryotic organisms
present in bacteria. Among these rare or unique mtDNA-encoded genes are dpo, rpoB,C, rrn5, rnpB, tufA, yejU-W, and several of the ribosomal protein genes.”
Jakoba
Species of bacterium
"Taxon 39" of Bisgaard. Phylogenetic analyses based on 16S rRNA, recN, and rpoB gene sequences revealed that these isolates form a distinct cluster within
Mannheimia_pernigra
Biological database
focusing on Mycobacterium tuberculosis at seven different mutation loci: rpoB, pncA, katG; mabA(fabG1)-inhA, gyrA, gyrB, and rrs. MUBII analyzes the query
MUBII-TB-DB
Species of bacterium
PMC 5819568. PMID 29497402. Adékambi T, Berger P, Raoult D, Drancourt M. (2006). "rpoB gene sequence-based characterization of emerging non-tuberculous mycobacteria
Mycolicibacterium_aubagnense
Species of bacterium
evolutionary relationship was then built between Desulfovibrio species based on RpoB and GyrB sequences, which may set a further precedent in the insight into
Desulfovibrio_alcoholivorans
Theory in the domain of evolutionary biology
coefficients and frequency of evolution for 35 resistance mutations in the rpoB (RNA polymerase) gene, and reported mutation rates for 11 of these. The mutation
Bias in the introduction of variation
Bias_in_the_introduction_of_variation
Species of bacterium
53 (1): 77–80. doi:10.1099/ijs.0.02268-0. ISSN 1466-5026. PMID 12656155. "RpoB - Legionella busanensis". UniProt Consortium. 3 April 2013. Retrieved 2013-09-17
Legionella_busanensis
Molecular structure formed in DNA transcription
Yoshida, Shin-ichi (October 1996). "Rifampicin resistance and mutation of the rpoB gene in Mycobacterium tuberculosis". FEMS Microbiology Letters. 144 (1):
Transcription_bubble
Species of bacterium
analysis based on concatenated sequences of five loci (16S rRNA, ftsZ, gltA, rpoB genes and the ITS region) demonstrated that B. acomydis forms a distinct
Bartonella_acomydis
Non-coding RNA
1995). "Sigma S-dependent overexpression of ftsZ in an Escherichia coli K-12 rpoB mutant that is resistant to the division inhibitors DicB and DicF RNA". Molecular
DicF_RNA
Plant molecular biologist
S2CID 232017220. Allison, LA, Simon, LD, Maliga, P (1996). "Deletion of rpoB reveals a second distinct transcription system in plastids of higher plants"
Pal_Maliga
Chemical compound
Andreas; Yu, Xiaoping (2016-04-01). "Characterization of representative rpoB gene mutations leading to a significant change in toyocamycin production
Toyocamycin
Species of bacterium
through the assembly of short sequence reads. Bacterial species identified by rpoB gene sequences were nucleotides. Comparison of gene sequences revealed that
Basilea_psittacipulmonis
South African researcher and professor
tuberculosis treatment in South Africa: a mixed methods study Consequences of rpoB mutations missed by the GenoType MTBDRplus assay in a programmatic setting
Patience_Mlisana_Koleka
Species of bacterium
sulfamethoxazole and imipenem. Differential characteristics Partial sequences of the rpoB (321 bp), 16S rRNA (1506 bp) and hsp65 (441 bp) genes are different from
Mycobacterium_cosmeticum
RPOB
RPOB
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RPOB
Girl/Female
Polish American Aramaic Scandinavian Spanish Swedish
Bitter.
Girl/Female
Tamil
Simple, Straight forward
Boy/Male
Arabic, Muslim
Fertile; Winner; Provider
Boy/Male
American, Australian, British, English, Japanese
Wolf's Shield; Variants of Randolph; Surname
Boy/Male
Hindu
Boy/Male
Tamil
Bajinath | பாஜீநாத
Lord Shiva
Girl/Female
Indian
Getting; Money
Boy/Male
Polish
Gift of God.
Girl/Female
German, Spanish
Pleasure; Delight
Boy/Male
Hindu, Indian
Born of a Lotus
RPOB
RPOB
RPOB
RPOB
RPOB