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Computational analysis of large, complex sets of biological data
definition placed bioinformatics as a field parallel to biochemistry (the study of chemical processes in biological systems). Bioinformatics and computational
Bioinformatics
This is a list of major bioinformatics institutions. National Center for Biotechnology Information (NCBI) European Bioinformatics Institute (EMBL-EBI) Australia
List of bioinformatics institutions
List_of_bioinformatics_institutions
Academic center in Iran
Iran Bioinformatics Center (IBC) is the only academic center in Iran working on Bioinformatics. Although there are some independent research groups such
Iran_Bioinformatics_Center
that focus on bioinformatics and computational biology. BioData Mining Bioinformatics Bioinformatics and Biology Insights BMC Bioinformatics Briefings in
List of bioinformatics journals
List_of_bioinformatics_journals
The list of bioinformatics software tools can be split up according to the license used: List of proprietary bioinformatics software List of open-source
Lists of bioinformatics software
Lists_of_bioinformatics_software
BioNumerics Astrid Research BIOBASE BioBam Bioinformatics creator of Blast2GO Biomax Informatics AG bioinformatics services. Biovia (formerly Accelrys). Chemical
List of bioinformatics companies
List_of_bioinformatics_companies
Translational bioinformatics (TBI) is a field that emerged in the 2010s to study health informatics, focused on the convergence of molecular bioinformatics, biostatistics
Translational_bioinformatics
SCHEMA is a computational algorithm used in protein engineering to identify fragments of proteins (called schemas) that can be recombined without disturbing
SCHEMA_(bioinformatics)
Institute of Bioinformatics is an academic not-for-profit foundation dedicated to biological and biomedical data science which federates bioinformatics activities
Swiss Institute of Bioinformatics
Swiss_Institute_of_Bioinformatics
(2010). "BioRuby: Bioinformatics software for the Ruby programming language". Bioinformatics. 26 (20): 2617–2619. doi:10.1093/bioinformatics/btq475. PMC 2951089
List of open-source bioinformatics software
List_of_open-source_bioinformatics_software
Academic journal
Briefings in Bioinformatics is a peer-reviewed scientific journal covering bioinformatics, including reviews of databases and analytical tools for genetics
Briefings_in_Bioinformatics
Academic journal
Bioinformatics is a biweekly peer-reviewed open-access scientific journal covering research and software in bioinformatics and computational biology. It
Bioinformatics_(journal)
Indian-Australian bioinformatian and academic
who is a professor of bioinformatics at Macquarie University. Her research considers computational biology and bioinformatics, genome annotation and
Shoba_Ranganathan
Dutch bioinformatics organization
Netherlands Bioinformatics Centre or NBIC (2003–2013) was a Dutch, government-funded organization, that coordinated all academic work on bioinformatics in the
Netherlands Bioinformatics Centre
Netherlands_Bioinformatics_Centre
Centre for research
Genetics (DNA Data Bank of Japan) Swiss Institute of Bioinformatics (SIB: Expasy) Australia Bioinformatics Resource BIG Data Center (National Genomics Data
European Bioinformatics Institute
European_Bioinformatics_Institute
The Open Bioinformatics Foundation is a non-profit, volunteer-run organization focused on supporting open source programming in bioinformatics. The mission
Open Bioinformatics Foundation
Open_Bioinformatics_Foundation
Academic journal
BMC Bioinformatics is a peer-reviewed open access scientific journal covering bioinformatics and computational biology published by BioMed Central. It
BMC_Bioinformatics
The Bioinformatics Centre is an interdisciplinary research in bioinformatics at the University of Copenhagen (UCPH). The centre is housed in the Section
UCPH_Bioinformatics_Centre
Bioinformatics technique
Scaffolding is a technique used in bioinformatics. It is defined as follows: Link together a non-contiguous series of genomic sequences into a scaffold
Scaffolding_(bioinformatics)
Intelligence of machines
Nivedha S, Prakash M (February 2020). "An Empirical Science Research on Bioinformatics in Machine Learning". Journal of Mechanics of Continua and Mathematical
Artificial_intelligence
Software for understanding biological data
Machine learning in bioinformatics is the application of machine learning algorithms to bioinformatics, including genomics, proteomics, microarrays, systems
Machine learning in bioinformatics
Machine_learning_in_bioinformatics
Academic organisation in Australia
QFAB Bioinformatics is a Queensland-based organisation concerned with the provision of resources in bioinformatics, biostatistics and specialised computing
QFAB_Bioinformatics
Scientific research institute in Pune, India
The Institute of Bioinformatics and Biotechnology (IBB) is an autonomous institute with an affiliation to the University of Pune. It was established in
Institute of Bioinformatics and Biotechnology
Institute_of_Bioinformatics_and_Biotechnology
"Classification of DNA sequences using Bloom filters". Bioinformatics. 26 (13): 1595–1600. doi:10.1093/bioinformatics/btq230. ISSN 1367-4803. PMC 2887045. PMID 20472541
Bloom filters in bioinformatics
Bloom_filters_in_bioinformatics
Indian academic research organization
resources". Bioinformatics. 25 (21): 2860–2. doi:10.1093/bioinformatics/btp453. PMC 2781757. PMID 19628504. "Institute of Bioinformatics (Funding)". "Nature
Institute of Bioinformatics, Bengaluru
Institute_of_Bioinformatics,_Bengaluru
Bioinformatics software company
data. BioBam has partnerships with bioinformatics companies like CLC bio and Biomatters, among others. "Bioinformatics Software". BioBam. Retrieved 2026-05-01
BioBam_Bioinformatics
The International Conference on Bioinformatics (InCoB) is a scientific conference on bioinformatics aimed at scientists in the Asia Pacific region. It
International Conference on Bioinformatics
International_Conference_on_Bioinformatics
discovering splice junctions with RNA-Seq". Bioinformatics. 25 (9): 1105–11. doi:10.1093/bioinformatics/btp120. PMC 2672628. PMID 19289445. "TopHat"
TopHat_(bioinformatics)
Animal or plant disease resulting from a viral infection
of Bioinformatics. Archived from the original on 2015-10-04. Retrieved 2015-10-03. "Bunyaviridae". ViralZone. SIB Swiss Institute of Bioinformatics. Archived
Viral_disease
American artificial intelligence company
Systems integration Open-source AI data centers Applications Art Music Bioinformatics Deepfake Earth sciences Finance Generative AI Audio Images Government
OpenAI
Flow cytometry bioinformatics is the application of bioinformatics to flow cytometry data, which involves storing, retrieving, organizing and analyzing
Flow_cytometry_bioinformatics
Bioinformatics subfield
Structural bioinformatics is the branch of bioinformatics that is related to the analysis and prediction of the three-dimensional structure of biological
Structural_bioinformatics
science computation as a whole in Victoria. Melbourne Bioinformatics together with QFAB Bioinformatics, QCIF and the University of Queensland’s Research Computing
Melbourne_Bioinformatics
of Bioinformatics. Currently, various Indian universities, Government and private institutions are involved in imparting courses in Bioinformatics in
BINC
Japanese research society
The Japanese Society for Bioinformatics (JSBi) is a Japanese research society on the subjects of bioinformatics and computational biology established in
Japanese Society for Bioinformatics
Japanese_Society_for_Bioinformatics
Bioinformatics Open Source Conference (BOSC) is an academic conference on open-source programming and other open science practices in bioinformatics,
Bioinformatics Open Source Conference
Bioinformatics_Open_Source_Conference
Technical book on Cloud Genomics
Genomics in the Azure Cloud: Scaling Your Bioinformatics Workloads Using Enterprise-Grade Solutions is a 2022 technical book by Colby T. Ford, published
Genomics_in_the_Azure_Cloud
Nigerian bioinformatics professor and research scientist
Adebiyi is a Nigerian bioinformatics professor and research scientist. He was appointed president of Nigerian Society of Bioinformatics and Computational
Ezekiel_Adebiyi
British bioinformatics researcher
popular bioinformatics textbooks: Introduction to Bioinformatics and Bioinformatics and Molecular Evolution. Attwood is a co-author of the bioinformatics textbook
Terri_Attwood
Pharmaceutical bioinformatics is a research field related to bioinformatics but with the focus on studying biological and chemical processes in the pharmaceutical
Pharmaceutical_bioinformatics
Type of AI with wide-ranging abilities
Systems integration Open-source AI data centers Applications Art Music Bioinformatics Deepfake Earth sciences Finance Generative AI Audio Images Government
Artificial general intelligence
Artificial_general_intelligence
Annual award by Bioinformatics.org
Awards in Bioinformatics and Computational Biology List of biology awards Prizes named after people "Benjamin Franklin Award - Bioinformatics.org". Retrieved
Benjamin Franklin Award (Bioinformatics)
Benjamin_Franklin_Award_(Bioinformatics)
AI that generates content
Systems integration Open-source AI data centers Applications Art Music Bioinformatics Deepfake Earth sciences Finance Generative AI Audio Images Government
Generative_AI
British bioinformatician
of Bioinformatics, and Head of Bioinformatics Group in the University College London. He is also the director in Bloomsbury Center for Bioinformatics, which
David_T._Jones_(biochemist)
Measure of distance between atoms of superimposed proteins
similarity using root-mean-squared-distance" (PDF). Bioinformatics. 19 (5): 625–634. doi:10.1093/bioinformatics/btg035. PMID 12651721.{{cite journal}}: CS1 maint:
Root mean square deviation of atomic positions
Root_mean_square_deviation_of_atomic_positions
Chilean-born Swedish biologist and computer scientist
Uppsala University in 1994. He is Professor of Bioinformatics and the head of SLU-Global Bioinformatics Centre at the Swedish University of Agricultural
Erik_Bongcam-Rudloff
US non-profit organization
that is open to anyone interested in bioinformatics irrespective of academic background and to provide bioinformatics training, mentorship and the opportunity
Bioinformatics Research Network
Bioinformatics_Research_Network
resources". Bioinformatics. 20 (12): 1962–3. doi:10.1093/bioinformatics/bth146. PMID 14988114. Liebel U, Kindler B, Pepperkok R (2005). "Bioinformatic "Harvester":
Bioinformatic_Harvester
Academic journal for computational biology and bioinformatics
computational methods used in bioinformatics and computational biology development and testing of effective computer programs in bioinformatics development and optimization
IEEE Transactions on Computational Biology and Bioinformatics
IEEE_Transactions_on_Computational_Biology_and_Bioinformatics
Graphical plot
In bioinformatics a dot plot is a graphical method for comparing two biological sequences and identifying regions of close similarity after sequence alignment
Dot_plot_(bioinformatics)
Database branch of the US National Library of Medicine
relevant to biotechnology and biomedicine and is an important resource for bioinformatics tools and services. Major databases include GenBank for DNA sequences
National Center for Biotechnology Information
National_Center_for_Biotechnology_Information
African academic conference
The ISCB Africa ASBCB Conference on Bioinformatics is a biennial academic conference on the subjects of bioinformatics and computational biology, organized
ISCB Africa ASBCB Conference on Bioinformatics
ISCB_Africa_ASBCB_Conference_on_Bioinformatics
Professional body for bioinformatics and computational biology in Africa
Society for Bioinformatics and Computational Biology (ASBCB) is a non-profit professional association dedicated to the advancement of bioinformatics and computational
African Society for Bioinformatics and Computational Biology
African_Society_for_Bioinformatics_and_Computational_Biology
Pairwise sequence alignment algorithm
web-based application of BLAT can be accessed from the UCSC Genome Bioinformatics Site. Building the index is a relatively slow procedure. Therefore,
BLAT_(bioinformatics)
Official website "Bioinformatics Institute". www.bii.a-star.edu.sg. Retrieved 2017-08-03. "Bioinformatics Institute". "Bioinformatics Institute - Featured
Bioinformatics Institute (Singapore)
Bioinformatics_Institute_(Singapore)
Public university in College Park, Maryland, US
The University of Maryland, College Park (University of Maryland, UMD, or simply Maryland) is a public land-grant research university in College Park,
University of Maryland, College Park
University_of_Maryland,_College_Park
South African academic
bioinformatics scientist, academic, and an author. He is Professor of Bioinformatics, and the director of the South African National Bioinformatics Institute
Alan_Christoffels
Academic journal
years for the Journal of Bioinformatics and Computational Biology (2003-2013) -- a retrospective". Journal of Bioinformatics and Computational Biology
Journal of Bioinformatics and Computational Biology
Journal_of_Bioinformatics_and_Computational_Biology
Video-generating LLM (2024–2026)
Systems integration Open-source AI data centers Applications Art Music Bioinformatics Deepfake Earth sciences Finance Generative AI Audio Images Government
Sora_(text-to-video_model)
German computer scientist
protein homology detection without alignment". Bioinformatics. 23 (14): 1728–1736. doi:10.1093/bioinformatics/btm247. PMID 17488755. "The neural networks
Sepp_Hochreiter
Online biomedical database
2009). "MiSearch adaptive pubMed search tool". Bioinformatics. 25 (7): 974–6. doi:10.1093/bioinformatics/btn033. PMC 2660869. PMID 18326507. Smalheiser
PubMed
pipeline framework to accelerate bioinformatics analysis". Bioinformatics. 33 (20): 3286–3288. doi:10.1093/bioinformatics/btx403. PMID 28633441. Kartashov
List of RNA-Seq bioinformatics tools
List_of_RNA-Seq_bioinformatics_tools
Academic journal
Current Bioinformatics is a peer-reviewed open access scientific journal, published by Bentham Science Publishers, covering areas such as such as computing
Current_Bioinformatics
State Agricultural University in Punjab, India
Punjab Agricultural University (PAU) is a public funded agricultural university located in Ludhiana, Punjab, India.[citation needed] It is a central agricultural
Punjab Agricultural University
Punjab_Agricultural_University
Lab technique in cellular biology
of short-read sequences using path encoding". Bioinformatics. 31 (12): 1920–8. doi:10.1093/bioinformatics/btv071. PMC 4481695. PMID 25649622. Grabherr
RNA-Seq
Series of bioinformatics training workshops
Canadian Bioinformatics Workshops (CBW) are a series of advanced training workshops in bioinformatics offered across Canada since 1999. The program was
Canadian Bioinformatics Workshops
Canadian_Bioinformatics_Workshops
(Pathosystems Resource Integration Center) was a bacterial bioinformatics website from the Bioinformatics Resource Center, originally created in 2004. It has
PATRIC
Projects involved in bioinformatics software on Linux
Provision of bioinformatics software repositories Addition of bioinformatics packages to standard distributions Live DVD/CDs with bioinformatics software
BioLinux
Scholarly society
Netherlands Bioinformatics Centre (NBIC), the African Society for Bioinformatics and Computational Biology, and the Japanese Society for Bioinformatics. The
International Society for Computational Biology
International_Society_for_Computational_Biology
Process in bioinformatics that identifies equivalent sites within molecular sequences
In bioinformatics, a sequence alignment is a way of arranging the sequences of DNA, RNA, or protein to identify regions of similarity that may be a consequence
Sequence_alignment
American scientific journal
Mark (2006-01-01). "Evolution, Bioinformatics and Evolutionary Bioinformatics Online". Evolutionary Bioinformatics. 2 117693430600200006. doi:10
Evolutionary_Bioinformatics
Israeli professor of computer science (born 1953)
Beverly Sackler Chair in Bioinformatics, and is the founder and former head of the Edmond J. Safra Center for Bioinformatics at Tel Aviv University. Ron
Ron_Shamir
online bioinformatics resource developed by the Laboratory of Human Retrovirology and Immunoinformatics (LHRI). All tools in the DAVID Bioinformatics Resources
DAVID
amino acids, and links among others. Biological data works closely with bioinformatics, which is a recent discipline focusing on addressing the need to analyze
Biological_data
Oligonucleotide Analysis Package) is a suite of bioinformatics software tools from the BGI Bioinformatics department enabling the assembly, alignment, and
Short Oligonucleotide Analysis Package
Short_Oligonucleotide_Analysis_Package
Online resource providing genomes and tools
genomes and a variety of tools for bioinformatic genome analysis. This resource was one of eight BRCs (Bioinformatics Resource Centers) funded by NIAID
Viral Bioinformatics Resource Center
Viral_Bioinformatics_Resource_Center
and its course, the S-Star Bioinformatics Online course. The goal is to provide course material for training in bioinformatics and genomics. The following
S*
French researcher
Olivier Gascuel (born 1956) is a French researcher in bioinformatics. He is a research director at the CNRS. His work focuses in particular on phylogeny
Olivier_Gascuel
context-specific amino acid substitution probabilities". Bioinformatics. 28 (24): 3240–7. doi:10.1093/bioinformatics/bts622. hdl:11858/00-001M-0000-0015-8D22-F. PMID 23080114
List of sequence alignment software
List_of_sequence_alignment_software
"Databases, data tombs and dust in the wind". Bioinformatics. 24 (19): 2127–8. doi:10.1093/bioinformatics/btn464. PMID 18819940. "Volume 46 Issue D1 |
List_of_biological_databases
Academic journal
network and interest group that aims to enhance bioinformatics services by bringing together bioinformatics expertises and capacities. On 2011 EMBnet has
EMBnet
Swiss academic
professor of proteomics and bioinformatics at the University of Geneva and executive director of the Swiss Institute of Bioinformatics. Ron Appel graduated in
Ron_Appel
ExoCarta is a manually curated database of exosomal proteins, RNA and lipids. Exosomes are cell-derived vesicles that are present in many and perhaps all
ExoCarta
Bioinformatician
Sequence Alignment/Map format and SAMtools". Bioinformatics. 25 (16): 2078–2079. doi:10.1093/bioinformatics/btp352. PMC 2723002. PMID 19505943.{{cite journal}}:
Heng_Li
Bioinformatics to the Biozentrum, university of Basel. The following year he also became a group leader at the SIB Swiss Institute of Bioinformatics.
Torsten_Schwede
Branch of machine learning
speech recognition, natural language processing, machine translation, bioinformatics, drug design, medical image analysis, climate science, material inspection
Deep_learning
Unique identifier given to DNA or a protein sequence
An accession number, in bioinformatics, is a unique identifier given to a DNA or protein sequence record to allow for tracking of different versions of
Accession number (bioinformatics)
Accession_number_(bioinformatics)
Japanese bioinformatician (born 1948)
Bioinformatics Japan. He is one of Japan's most recognized and respected bioinformatics experts and is known for developing the KEGG bioinformatics database
Minoru_Kanehisa
Subset of artificial intelligence
including Web usage mining, intrusion detection, continuous production, and bioinformatics. In contrast with sequence mining, association rule learning typically
Machine_learning
problems representing key issues for bioinformatics service providers and end-user biologists. EMBRACE made many bioinformatics web services available to the
EMBRACE
proteomics, and bioinformatics. Marcotte is an example of a computational biologist who also relies on experiments to validate bioinformatics-based predictions
Edward_Marcotte
Greek computational biologist
(Greece), the Hellenic Society for Computational Biology & Bioinformatics and Hellenic Bioinformatics. He is an active member of the MetaSUB consortium and
Christos_Ouzounis
American computer scientist
for Bioinformatics & Computational Biology (CBCB). Wu is also the director of the Protein Information Resource (PIR) and the North east Bioinformatics Collaborative
Cathy_H._Wu
structure using generalized centroid estimators". Bioinformatics. 25 (4): 465–473. doi:10.1093/bioinformatics/btn601. PMID 19095700. Hamada M, Sato K, Kiryu
List of RNA structure prediction software
List_of_RNA_structure_prediction_software
Academic journal
Bioinformatics and Biology Insights is a peer-reviewed open access academic journal focusing on the application of bioinformatics to biological research
Bioinformatics and Biology Insights
Bioinformatics_and_Biology_Insights
Computational biologist
"Java bioinformatics analysis web services for multiple sequence alignment--JABAWS:MSA". Bioinformatics. 27 (14): 2001–2. doi:10.1093/bioinformatics/btr304
Geoff_Barton_(scientist)
Expert Protein-Analysis System
Expasy is an online bioinformatics resource operated by the SIB Swiss Institute of Bioinformatics. It is an extensible and integrative portal which provides
Expasy
Algorithm used in gene expression studies
The RNA integrity number (RIN) is an algorithm for assigning integrity values to RNA measurements. The integrity of RNA is a major concern for gene expression
RNA_integrity_number
Bioinformatics computer program
program used for multiple sequence alignment in bioinformatics. It is one of the most widely cited bioinformatics software with two of its academic publications
Clustal
Chemical database of bioactive molecules also having drug-like properties
Comparative Genomics of Drug Metabolising Systems". Bioinformatics. 31 (10): 1695–1697. doi:10.1093/bioinformatics/btv010. PMC 4426839. PMID 25964657. Wikidata
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