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Branch of bioinformatics
Biological data visualization is a branch of bioinformatics concerned with the application of computer graphics, scientific visualization, and information
Biological_data_visualization
Visual representation of data
in data visualization includes charts and graphs, geospatial maps, figures, correlation matrices, percentage gauges, etc.. Information visualization deals
Data and information visualization
Data_and_information_visualization
characterized as biological data. Biological data is highly complex when compared with other forms of data. There are many forms of biological data, including
Biological_data
efficient algorithms, data structures, visualization and communication tools with the goal of computer modelling of biological systems. It involves the
Modelling_biological_systems
Process of progressive accumulation in food chain
Biomagnification, also known as bioamplification or biological magnification, is the increase in concentration of a substance in the tissues of organisms
Biomagnification
Non-living factors that affect organisms and ecosystems
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Abiotic_component
Graphical representation of biomass or biomass productivity
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Ecological_pyramid
Interdisciplinary branch of science concerned with presenting scientific data visually
Scientific visualization (also spelled scientific visualisation) is an interdisciplinary branch of science concerned with the visualization of scientific
Scientific_visualization
sequence, e.g., comparative modelling. Sequence alignment software Biological data visualization Comparison of software for molecular mechanics modeling
List of alignment visualization software
List_of_alignment_visualization_software
Visual representation of a piece of data
the context of data visualization, a glyph is any marker, such as an arrow or similar marking, used to specify part of a visualization. This is a representation
Glyph_(data_visualization)
Study of distribution of species
ecosystems in geographic space and through geological time. Organisms and biological communities often vary in a regular fashion along geographic gradients
Biogeography
Smallest size a biological population can exist without facing extinction
conservation biology. MVP refers to the smallest possible size at which a biological population can exist without facing extinction from natural disasters
Minimum_viable_population
Dead particulate organic material
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Detritus
Ecogeographical rule in evolutionary biology
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Foster's_rule
Type of heterotrophic nutrition based on decayed organic matter
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Saprotroph
Virus that infects bacteria
on Earth, including bacteria, combined. Viruses are the most abundant biological entity in the water column of the world's oceans, and the second largest
Bacteriophage
Aspect of ecosystems
and the base of the chain. Studies of food chains are essential to many biological studies. Stability of the food chain is crucial for survival of most species
Food_chain
Predator at the top of a food chain
E. (2013). "Saving large carnivores, but losing the apex predator?". Biological Conservation. 168: 128–133. Bibcode:2013BCons.168..128O. doi:10.1016/j
Apex_predator
Effect that organisms have on other organisms
In ecology, a biological interaction is the effect that a pair of organisms living together in a community have on each other. They can be either of the
Biological_interaction
Ratio of animal feed to desired product
slaughtering pigs at very high weights, like Japan and Korea, have poor FCRs. Some data for sheep illustrate variations in FCR. An FCR (kg feed dry matter intake
Feed_conversion_ratio
Living creatures that eat organisms from a different population
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Consumer_(food_chain)
Animal that feeds on decomposing plant and animal parts as well as faeces
detritivores regulate nutrient cycling in a desert ecosystem". Proceedings. Biological Sciences. 286 (1914) 20191647. doi:10.1098/rspb.2019.1647. PMC 6842856
Detritivore
Species that is able to thrive in a wide variety of environmental conditions
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Generalist and specialist species
Generalist_and_specialist_species
Position of an organism in a food chain
transfer efficiencies are only about 10%, it follows that the rate of biological production is much greater at lower trophic levels than it is at higher
Trophic_level
Symbiotism between certain parasitic plants and fungi
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Myco-heterotrophy
molecule interactions XRD – X-ray crystallography data such as electron density Biological data visualization Comparison of nucleic acid simulation software
List of molecular graphics systems
List_of_molecular_graphics_systems
Number of distinct species in a biological community
edition. Addison-Wesley, California. Magurran, A. E. (2004) Measuring biological diversity. Blackwell Publishing, Oxford. Jost, L. (2006) Entropy and diversity
Species_diversity
Superseded ecological theory
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Balance_of_nature
Approximate power law relating animal metabolic rate to mass
Kleiber's law, named after Max Kleiber for his biological research in the early 1930s, states that, in the vast majority of cases, the basal metabolic
Kleiber's_law
General appearance of an animal
(September 1984). "Frequency dependent selection: homage to E. B. Poulton". Biological Journal of the Linnean Society. 23 (1): 15–18. doi:10.1111/j.1095-8312
Animal_coloration
Equations modelling predator–prey cycles
nonlinear differential equations, frequently used to describe the dynamics of biological systems in which two species interact, one as a predator and the other
Lotka–Volterra_equations
Organism type
producers, organisms that are capable of producing energy on their own, the biological systems of Earth would be unable to sustain themselves. Plants, along
Autotroph
Organism that breaks down dead or decaying organisms
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Decomposer
Ecological theory concerning the selection of life history traits
gaps in the theory, and to ambiguities in the interpretation of empirical data for testing it. In 1981, a review of the r/K selection literature by Parry
R/K_selection_theory
Study of organisms and their environment
abbreviation of "biological diversity") describes the diversity of life from genes to ecosystems and spans every level of biological organization. The
Ecology
Animal that can eat and survive on both plants and animals
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Omnivore
Community of living organisms together with the nonliving components of their environment
animals, microbes and the soil. Most nitrogen enters ecosystems through biological nitrogen fixation, is deposited through precipitation, dust, gases or
Ecosystem
Non-native organism causing damage to an established environment
Invasion by Animals and Plants which creates a generalized picture of biological invasions. Studies remained sparse until the 1990s. This research, largely
Invasive_species
Organisms that obtain energy by the oxidation of electron donors in their environments
autotrophic organisms that can rely on chemosynthesis, i.e. deriving biological energy from chemical reactions of environmental inorganic substrates and
Chemotroph
Fit of a species living under specific environmental conditions
non-indigenous species to non-native habitats by humans often results in biological pollution by the exotic or invasive species. The mathematical representation
Ecological_niche
algorithms, data structures, visualization and communication tools to orchestrate the integration of large quantities of biological data with the goal
Cellular_model
American computer graphics researcher
Career Award for Visualization Research from the IEEE Technical Committee on Visualization and Graphics (VGTC) at the IEEE Visualization Conference, He
Pat_Hanrahan
Transition area between two biological communities
flightless Trigonopterus weevils on Bali". Proceedings of the Royal Society B: Biological Sciences. 281 (1782) 20132528. doi:10.1098/rspb.2013.2528. PMC 3973253
Ecotone
Process of breaking down organic matter
taphonomy specifically studies the processes of decomposition to apply the biological and chemical principles to forensic cases to determine post-mortem interval
Decomposition
Beneficial symbiosis between species
Commensalism is a long-term biological interaction (symbiosis) in which members of one species gain benefits while those of the other species neither benefit
Commensalism
Population phenomenon in biology
two dimensional analysis yields an Allee curve in human exploiter and biological population space and that this curve separating species destined to extinction
Allee_effect
Variety of species in an ecological community, landscape or region
terrestrial biodiversity through extrapolation. Philosophical Transactions: Biological Sciences, 345, 101–118. Chao, A. (1984) Non-parametric estimation of the
Species_richness
Event or force driving ecological change via mortality
support a variety of wildlife, temporarily increasing biological diversity in the forest. Biological diversity is dependent on natural disturbance. The success
Disturbance_(ecology)
Geographical area in which a species can be found
Species distribution, or species dispersion, is the manner in which a biological taxon is spatially arranged. The geographic limits of a particular taxon's
Species_distribution
Emission of light by a living organism
discovery and development of green fluorescent protein as a tool for biological research. Harvey wrote a detailed historical account on all forms of luminescence
Bioluminescence
Part of Earth's aquatic ecosystems
ecosystems are a subset of Earth's aquatic ecosystems that include the biological communities inhabiting freshwater waterbodies such as lakes, ponds, rivers
Freshwater_ecosystem
Change of species in a region over time
Amissah; Frans Bongers; et al. (16 July 2023). "Successional theories". Biological Reviews. 98 (6): 2049–2077. doi:10.1111/BRV.12995. ISSN 1464-7931. PMID 37455023
Ecological_succession
Ecological concept
effects in biological assays refer to artifacts in data that are caused by the position of the wells on a screening plate rather than a biological effect
Edge_effects
Species introduced by human activity
naturalized. The process of human-caused introduction is distinguished from biological colonization, in which species spread to new areas through "natural" (non-human)
Introduced_species
Flow of energy through food chains in ecological energetics
1016/B978-012505290-0/50004-1. ISBN 978-0-12-505290-0. Sigman DM, Hain MP (2012). "The biological productivity of the ocean" (PDF). Nature Education Knowledge. 3 (6): 1–6
Energy_flow_(ecology)
Chemical transfer pathway between Earth's biological and non-biological parts
Delmont, Tom O. (2015). "Anvi'o: An advanced analysis and visualization platform for 'omics data". PeerJ. 3 e1319. doi:10.7717/peerj.1319. PMC 4614810. PMID 26500826
Biogeochemical_cycle
Mutually beneficial interaction between species
addition, mutualism is thought to have driven the evolution of much of the biological diversity we see, such as flower forms (important for pollination mutualisms)
Mutualism_(biology)
Gradual buildup of substances in an organism
lost or eliminated by catabolism and excretion. Thus, the longer the biological half-life of a toxic substance, the greater the risk of chronic poisoning
Bioaccumulation
Type of environment in which an organism lives
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Habitat
Biological principle about the differential reproductive success in males versus females
PMID 23360967. Tang-Martinez, Zuleyma (20 January 2017). "Data Should Smash the Biological Myth of Promiscuous Males and Sexually Coy Females". The Conversation
Bateman's_principle
Organism found in carbon-rich environments
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Copiotroph
Type of animal group activity
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Feeding_frenzy
Hypothesis that predators are the primary regulators of ecosystems
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Green_world_hypothesis
Mature ecological community of organisms best adapted to an area
and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences. 38 (1): 85–109. doi:10.1016/j.shpsc.2006.12.006
Climax_community
Measure of the ability of water to sustain biological productivity
classification system designed to rate water bodies based on the amount of biological productivity they sustain. Although the term "trophic index" is commonly
Trophic_state_index
Ecosystem limited to a small space
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Microecosystem
Ecological niche
chemical and visual information". Proceedings of the Royal Society B: Biological Sciences. 267 (1443): 571–75. doi:10.1098/rspb.2000.1039. PMC 1690576
Ecosystem_engineer
Hypothetic organism that uses kinetic energy
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Kinetotroph
Species with a large effect on its environment
and Ecology. ISBN 978-0-642-21423-2. Walker, Brian (1995). "Conserving Biological Diversity through Ecosystem Resilience". Conservation Biology. 9 (4):
Keystone_species
Plant succession limited by water availability
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Xerosere
Organism that eats mostly or exclusively animal tissue
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Carnivore
Modeling language used in energy flow diagrams
systems. The intention was, and for those who still apply it, is, to make biological, physical, ecological, economic and other system models thermodynamically
Energy_systems_language
Ability to withstand disturbance unchanged
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Resistance_(ecology)
Harvestable population growth in an ecosystem
prey is converted into biomass in its predator, some losses occur due to biological and thermodynamic inefficiency. The conversion rate is typically about
Ecological_yield
Animal that feeds on carrion
in any aquatic system, there are a large number of environmental and biological factors that can confound calculation of minimum post-mortem interval
Necrophage
Ecosystem event
global patterns in species diversity". Proceedings of the Royal Society B: Biological Sciences. 285 (1883) 20180949. Bibcode:2018RSPSB.28580949Z. doi:10.1098/rspb
Trophic_cascade
Growth is limited by the scarcest resource
scarcest resource (limiting factor). The law has also been applied to biological populations and ecosystem models for factors such as sunlight or mineral
Liebig's_law_of_the_minimum
Behavior characterized by activity during the night and sleeping during the day
nocturnal bottleneck of mammals". Proceedings of the Royal Society B: Biological Sciences. 279 (1749): 4962–4968. doi:10.1098/rspb.2012.2258. PMC 3497252
Nocturnal_animal
Three biological processes
behavioral ecology, and cell biology, recruitment refers to several different biological processes. In population dynamics, recruitment is the process by which
Recruitment_(biology)
Unit of information
remanence Data science Data storage Data set Data structure Data visualization Data warehouse Database Datasheet Data-driven programming Data-driven journalism
Data
Total mass of living organisms in a given area (all species or selected species)
Biomass is the total mass of living biological organisms in a given area or ecosystem at a specific time. Biomass may refer to the species biomass, which
Biomass_(ecology)
Ecological metric
(satellite) Phototroph Photosynthetically active radiation Renewable biological systems for unsustainable energy production. FAO Agricultural Services
Photosynthetic_efficiency
Concept in population dynamics
Other Allometry Alternative stable state Balance of nature Biological data visualization Ecological economics Ecological footprint Ecological forecasting
Depensation
Associated populations of species in a given area
area at the same time, also known as a biocoenosis, biotic community, biological community, ecological community, or life assemblage. The term community
Community_(ecology)
Biological interaction
Predation is a biological interaction in which one organism, the predator, kills and eats another organism, its prey. It is one of a family of common feeding
Predation
Microbe which derives energy from minerals
Hooper, A.B.; DiSpirito, A.A. (2013), "Chemolithotrophy", Encyclopedia of Biological Chemistry, Elsevier, pp. 486–492, doi:10.1016/b978-0-12-378630-2.00219-x
Lithoautotroph
Species protected to aid further species
case of a threatened butterfly and a vanishing grassland ecosystem". Biological Conservation. 69 (2): 145–153. doi:10.1016/0006-3207(94)90054-x. Nuwer
Umbrella_species
When a population of a species exceeds the carrying capacity of its environment
smaller human populations are necessary to preserve what is left" (PDF). Biological Conservation. 272 109646. Bibcode:2022BCons.27209646C. doi:10.1016/j.biocon
Overpopulation
Concept in ecology
biologists attempt to fit a mathematical model to real data sets and infer the underlying biological principles at work from the model parameters. By contrast
Relative_species_abundance
Ecogeographical rule describing reproductive strategies of marine invertebrates
Antarctic and sub-Antarctic waters, against less than 1% in tropical waters. Data compiled by A.V. Gusev in 1978 indicates that Gyrodactylidae may also be
Thorson's_rule
Rocky pool on a seashore, separated from the sea at low tide, filled with seawater
Effects on Shell Selection by the Hermit Crab Pagurus longicarpus". The Biological Bulletin. 235 (3): 178–184. doi:10.1086/700188. ISSN 0006-3185. PMID 30624115
Tide_pool
Biological process
In biochemistry, chemosynthesis is the biological conversion of one or more carbon-containing molecules (usually carbon dioxide or methane) and nutrients
Chemosynthesis
Fissure in a planet's surface from which heated water emits
the majority of the deep sea, the areas around hydrothermal vents are biologically more productive, often hosting complex communities fueled by the chemicals
Hydrothermal_vent
Natural interconnection of food chains
carnivore. Linkages connect to nodes in a food web, which are aggregates of biological taxa called trophic species. Trophic species are functional groups that
Food_web
Concept in ecology
Groves, R.H., Kruger, F.J., Rejmánek, M. and Williamson, M. (1989). Biological Invasions: A Global Perspective, SCOPE 37. John Wiley and Sons. ISBN 0-471-92085-1
Species_homogeneity
Concept in population ecology
parasite distribution to become overdispersed. For instance, time-series data for Onchocerciasis infection demonstrates that 10 years of vector control
Density_dependence
Ecogeographical principle
latitudinal gradients in species diversity and the rule have identical exceptional data and so must have the same underlying cause. Narrower ranges in the tropics
Rapoport's_rule
Concept in conservation biology
keystones: Is single-species management passé in the landscape era?". Biological Conservation. 83 (3): 247–257. Bibcode:1998BCons..83..247S. doi:10
Flagship_species
microscopy; MG = Molecular graphics; Optical = Optical microscopy. Biological data visualization List of molecular graphics systems "Amira® - Request Trial License
List of microscopy visualization systems
List_of_microscopy_visualization_systems
Interdependence of human economies and natural ecosystems
physics (particularly the laws of thermodynamics) and in knowledge of biological systems. It accepts as a goal the improvement of human well-being through
Ecological_economics
BIOLOGICAL DATA-VISUALIZATION
BIOLOGICAL DATA-VISUALIZATION
Female
Finnish
 Short form of Finnish Katariina, KATA means "pure." Compare with other forms of Kata.
Male
Hebrew
Variant spelling of Hebrew Dathan, DATAN means "belonging to a fountain."
Male
Iranian/Persian
 Short form of Persian Dârayavahush, DARA means "possesses a lot, wealthy." Compare with other forms of Dara.
Male
Hebrew
(דֶּרַע) Hebrew name DARA means "the arm." In the bible, this is the name of a son of Zerah. Compare with other forms of Dara.
Female
English
 Middle English name DARA means "brave, daring." Compare with another form of Dara.
Female
Hebrew
(דִּיתָה) Pet form of Hebrew Yehuwdiyth, DITA means "Jewess" or "praised." Compare with another form of Dita.
Female
Polish
Short form of Polish Edyta, DYTA means "rich battle."
Male
English
English surname transferred to unisex forename use, possibly DANA means "from Denmark."
Female
Hindi/Indian
(लता) Hindi name derived from a plant name, from the Sanskrit word lata, LATA means "creeper," in reference to a creeping plant.
Female
Finnish
Variant form of Finnish Aada, AATA means "noble."
Male
Irish
Irish Gaelic name MAC DARA means "son of oak." This is the name of a patron saint and is still common in Ireland, especially in Connemara.
Male
Irish
 From Irish Gaelic Mac Dara, DARA means "son of oak." Compare with other forms of Dara.
Male
Turkish
Turkish name ATA means "ancestor."
Female
Slavic
 Short form of Slavic Bogdana, DANA means "gift from God." Compare with other forms of Dana.
Female
Russian
 Short form of Russian Yekaterina, KATA means "pure." Compare with other forms of Kata.
Female
Hungarian
 Short form of Hungarian Katalin, KATA means "pure." Compare with other forms of Kata.
Boy/Male
Hindu, Indian
Biological
Female
English
 English surname transferred to unisex forename use, possibly DANA means "from Denmark." Compare with other forms of Dana.
Female
Polish
 Variant spelling of Polish Dyta, DITA means "rich battle." Compare with another form of Dita.
Female
Hebrew
(×“Ö¼Ö¸× Ö¸×”) Feminine form of Hebrew Dan, DANA means "judge." Compare with other forms of Dana.
BIOLOGICAL DATA-VISUALIZATION
BIOLOGICAL DATA-VISUALIZATION
Female
French
Feminine form of French Arnaud, ARNAUDE means "eagle power."
Boy/Male
Hindu, Indian, Sanskrit, Traditional
Constant in Dharma
Boy/Male
Tamil
NandiGhosh | நஂதீகோஷ
Music of Joy
Boy/Male
Indian
Ornament of the worshippers
Female
Polish
Feminine form of Polish Gabryjel, GABRYJELA means "man of God"Â or "warrior of God."
Girl/Female
Arabic, Muslim
Protector
Boy/Male
Indian, Sanskrit
Incomparable; Rare; Precious; Ginger
Boy/Male
Hindu, Indian, Punjabi, Sikh
Light of Guru's Lotus Feet
Girl/Female
Tamil
Deva Nandana | தேவா நஂதநாÂ
God
Boy/Male
Tamil
Lord of the truth
BIOLOGICAL DATA-VISUALIZATION
BIOLOGICAL DATA-VISUALIZATION
BIOLOGICAL DATA-VISUALIZATION
BIOLOGICAL DATA-VISUALIZATION
BIOLOGICAL DATA-VISUALIZATION
a.
Ignorant or negligent of the rules of logic or correct reasoning; as, an illogical disputant; contrary of the rules of logic or sound reasoning; as, an illogical inference.
adv.
In a neological manner.
n.
That addition to a writing, inscription, coin, etc., which specifies the time (as day, month, and year) when the writing or inscription was given, or executed, or made; as, the date of a letter, of a will, of a deed, of a coin. etc.
v. t.
To note the time of writing or executing; to express in an instrument the time of its execution; as, to date a letter, a bond, a deed, or a charter.
a.
Of or relating to biology.
a.
Alt. of Geological
n. pl.
See Datum.
a.
Pertaining to the study of inanimate things.
a.
Neologic; neological.
a.
Alt. of Myological
a.
Alt. of Neological
n.
The point of time at which a transaction or event takes place, or is appointed to take place; a given point of time; epoch; as, the date of a battle.
n.
The fruit of the date palm; also, the date palm itself.
adv.
In a geological manner.
a.
Alt. of Biological
pl.
of Datum
a.
Circular; illogical.
a.
Relating to bryology; as, bryological studies.
v. t.
To note or fix the time of, as of an event; to give the date of; as, to date the building of the pyramids.
a.
Containing paralogism; illogical.