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ShiftX (Shifts from X-ray structures) is a freely available web server for rapidly calculating protein chemical shifts from protein X-ray (or NMR) coordinates
ShiftX
of interest [1]. The predicted chemical shifts are calculated using the ShiftX program. The SHIFTCOR program was originally used to construct a database
SHIFTCOR
Data types captured Data input: Chemical shift assignments in BMRB, NEF, SHIFTX or SHIFTY format; Data output: Reference-corrected chemical shift assignments
Probabilistic Approach for Protein NMR Assignment Validation
Probabilistic_Approach_for_Protein_NMR_Assignment_Validation
assembled by using a structure-based chemical shift calculation program (called SHIFTX) to calculate expected protein (1)H, (13)C and (15)N chemical shifts from
RefDB_(chemistry)
prediction, and chemical shift refinement. CS23D makes use of RefDB and ShiftX. CS23D accepts chemical shift files in either SHIFTY or BMRB formats. A
CS23D
Figure 1 for details). SHIFTCOR uses the chemical shift calculation program SHIFTX to predict 1Hα, 13Cα,15N shifts based on the 3D structure coordinates of
Protein chemical shift re-referencing
Protein_chemical_shift_re-referencing
All the computational speed tests for SPARTA, SPARTA+, SHIFTS, CamShift, SHIFTX and SHIFTX2 were performed on the same computer using the same set of proteins
Protein chemical shift prediction
Protein_chemical_shift_prediction
Figure 1 for details). SHIFTCOR uses the chemical shift calculation program SHIFTX to predict 1Hα, 13Cα,15N shifts based on the 3D structure coordinates of
Nuclear magnetic resonance chemical shift re-referencing
Nuclear_magnetic_resonance_chemical_shift_re-referencing
Canadian bioinformatician (born 1961)
predict protein chemical shifts from 3D coordinates using programs such as ShiftX and ShiftX2. At the same time he also developed methods to re-reference
David_S._Wishart
sampling and structural refinement using non-differentiable scores, such as ShiftX chemical shift scores. GeNMR's genetic algorithm creates a population of
GeNMR
(Software) DSSP (algorithm) MOLMOL Matplotlib Nmrpipe PROCHECK/Aqua POV-Ray ShiftX TALOS+ WHAT_CHECK Archived 2011-05-01 at the Wayback Machine Wattos XPLOR-NIH
CING (biomolecular NMR structure)
CING_(biomolecular_NMR_structure)
System for validating protein structures
Specifically, PROSESS assesses the agreement between observed chemical shifts and ShiftX-predicted HA, CA, CB, N, C, and HN NMR chemical shifts. In addition to its
Protein Structure Evaluation Suite & Server
Protein_Structure_Evaluation_Suite_&_Server
SHIFTX
SHIFTX
SHIFTX
SHIFTX
Boy/Male
Tamil
Krishnasai | கà¯à®°à¯€à®·à¯à®¨à®¾à®¸à®¾à®ˆ
Dark complexioned, Lord Krishna, Name of a river
Girl/Female
Muslim/Islamic
Wealth riches
Boy/Male
Indian, Punjabi, Sikh
Love for Wealth
Female
English
Variant spelling of French Oriane, possibly ORIANNE means "golden."
Boy/Male
Arabic
Keeper of the treasure.
Boy/Male
Bengali, Gujarati, Hindu, Indian, Jain, Kannada, Malayalam, Marathi, Telugu
A Form of Worship
Girl/Female
Bengali, Indian, Modern
One of Three Unity
Surname or Lastname
English
English : habitational name from Witherington Down or Witherington Farm in Wiltshire, or Witherenden in Ticehurst, Sussex. The Wiltshire places are named from an Old English wīðign ‘willow copse’ + Old English tūn ‘settlement’. Witherenden is from the Old English personal name Wither + -ing- denoting association with + denn ‘woodland pasture’.
Girl/Female
Greek
From Delphi.
Surname or Lastname
English
English : variant spelling of Layton.Galician and Portuguese : perhaps a variant spelling of Leitón, or Leitã (Galacian) a nickname meaning ‘suckling pig’.
SHIFTX
SHIFTX
SHIFTX
SHIFTX
SHIFTX